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A common variant near TGFBR3 is associated with primary open angle glaucoma

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posted on 2023-05-18, 09:15 authored by Li, Z, Allingham, RR, Nakano, M, Jia, L, Chen, Y, Ikeda, Y, Mani, B, Chen, LJ, Kee, C, Garway-Heath, DF, Sripriya, S, Fuse, N, Abu-Amero, KK, Huang, C, Namburi, P, Kathryn BurdonKathryn Burdon, Perera, SA, Gharahkhani, P, Lin, Y, Ueno, M, Ozaki, M, Mizoguchi, T, Krishnadas, SR, Osman, EA, Lee, MC, Chan, AS, Tajudin, LS, Do, T, Goncalves, A, Reynier, P, Zhang, H, Bourne, R, Goh, D, Broadway, D, Husain, R, Negi, AK, Su, DH, Ho, CL, Blanco, AA, Leung, CK, Wong, TT, Yakub, A, Liu, Y, Nongpiur, ME, Han, JC, Hon, DN, Shantha, B, Zhao, B, Sang, J, Zhang, N, Sato, R, Yoshii, K, Panda-Jonas, S, Ashley Koch, AE, Herndon, LW, Moroi, SE, Challa, P, Foo, JN, Bei, JX, Zeng, YX, Simmons, CP, Bich Chau, TN, Sharmila, PF, Chew, M, Lim, B, Tam, PO, Chua, E, Ng, XY, Yong, VH, Chong, YF, Meah, WY, Vijayan, S, Seongsoo, S, Xu, W, Teo, YY, Cooke Bailey, JN, Kang, JH, Haines, JL, Cheng, CY, Saw, SM, Tai, ES, Richards, JE, Ritch, R, Gaasterland, DE, Pasquale, LR, Liu, J, Jonas, JB, Milea, D, George, R, Al-Obeidan, SA, Mori, K, MacGregor, S, Alexander HewittAlexander Hewitt, Girkin, CA, Zhang, M, Sundaresan, P, Vijaya, L, David MackeyDavid Mackey, Wong, TY, Craig, JE, Sun, X, Kinoshita, S, Wiggs, JL, Khor, CC, Yang, Z, Pang, CP, Wang, N, Hauser, MA, Tashiro, K, Aung, T, Vithana, EN
Primary open angle glaucoma (POAG), a major cause of blindness worldwide, is a complex disease with a significant genetic contribution. We performed Exome Array (Illumina) analysis on 3504 POAG cases and 9746 controls with replication of the most significant findings in 9173 POAG cases and 26 780 controls across 18 collections of Asian, African and European descent. Apart from confirming strong evidence of association at CDKN2B-AS1 (rs2157719 [G], odds ratio [OR] = 0.71, P = 2.81 × 10−33), we observed one SNP showing significant association to POAG (CDC7TGFBR3 rs1192415, ORG-allele = 1.13, Pmeta = 1.60 × 10−8). This particular SNP has previously been shown to be strongly associated with optic disc area and vertical cup-to-disc ratio, which are regarded as glaucoma-related quantitative traits. Our study now extends this by directly implicating it in POAG disease pathogenesis.

History

Publication title

Human Molecular Genetics

Volume

24

Issue

13

Pagination

3880-3892

ISSN

1460-2083

Department/School

Menzies Institute for Medical Research

Publisher

Oxford University Press

Place of publication

United Kingdom

Rights statement

Licensed under Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) http://creativecommons.org/licenses/by-nc/4.0/

Repository Status

  • Open

Socio-economic Objectives

Clinical health not elsewhere classified

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