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Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake
Citation
Yau, S and Lauro, FM and Williams, TJ and DeMaere, MZ and Brown, MV and Rich, J and Gibson, JAE and Cavicchioli, R, Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake, ISME Journal, 7 pp. 1944-1961. ISSN 1751-7362 (2013) [Refereed Article]
Copyright Statement
Copyright 2013 International Society for Microbial Ecology All rights reserved
DOI: doi:10.1038/ismej.2013.69
Abstract
Organic Lake is a shallow, marine-derived hypersaline lake in the Vestfold Hills, Antarctica that has
the highest reported concentration of dimethylsulfide (DMS) in a natural body of water. To determine
the composition and functional potential of the microbial community and learn about the unusual
sulfur chemistry in Organic Lake, shotgun metagenomics was performed on size-fractionated
samples collected along a depth profile. Eucaryal phytoflagellates were the main photosynthetic
organisms. Bacteria were dominated by the globally distributed heterotrophic taxa Marinobacter,
Roseovarius and Psychroflexus. The dominance of heterotrophic degradation, coupled with
low fixation potential, indicates possible net carbon loss. However, abundant marker genes for
aerobic anoxygenic phototrophy, sulfur oxidation, rhodopsins and CO oxidation were also linked
to the dominant heterotrophic bacteria, and indicate the use of photo- and lithoheterotrophy as
mechanisms for conserving organic carbon. Similarly, a high genetic potential for the recycling of
nitrogen compounds likely functions to retain fixed nitrogen in the lake. Dimethylsulfoniopropionate
(DMSP) lyase genes were abundant, indicating that DMSP is a significant carbon and energy source.
Unlike marine environments, DMSP demethylases were less abundant, indicating that DMSP
cleavage is the likely source of high DMS concentration. DMSP cleavage, carbon mixotrophy
(photoheterotrophy and lithoheterotrophy) and nitrogen remineralization by dominant Organic Lake
bacteria are potentially important adaptations to nutrient constraints. In particular, carbon
mixotrophy relieves the extent of carbon oxidation for energy production, allowing more carbon
to be used for biosynthetic processes. The study sheds light on how the microbial community has
adapted to this unique Antarctic lake environment.
Item Details
Item Type: | Refereed Article |
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Keywords: | Organic Lake, bacteria. DMS |
Research Division: | Biological Sciences |
Research Group: | Genetics |
Research Field: | Genetics not elsewhere classified |
Objective Division: | Environmental Management |
Objective Group: | Management of Antarctic and Southern Ocean environments |
Objective Field: | Biodiversity in Antarctic and Southern Ocean environments |
UTAS Author: | Gibson, JAE (Dr John Gibson) |
ID Code: | 88991 |
Year Published: | 2013 |
Web of Science® Times Cited: | 52 |
Deposited By: | IMAS Research and Education Centre |
Deposited On: | 2014-02-22 |
Last Modified: | 2014-06-12 |
Downloads: | 0 |
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