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Site-Specific Risk Factors for Ray Blight in Tasmanian Pyrethrum Fields

Citation

Pethybridge, SJ and Gent, DH and Esker, PD and Turechek, WW and Hay, FS and Nutter Jnr, FW, Site-Specific Risk Factors for Ray Blight in Tasmanian Pyrethrum Fields, Plant Disease, 93, (3) pp. 229-237. ISSN 0191-2917 (2009) [Refereed Article]

DOI: doi:10.1094/PDIS-93-3-0229

Abstract

Ray blight of pyrethrum (Tanacetum cinerariifolium), caused by Phoma ligulicola var. inoxydablis, can cause defoliation and reductions of crop growth and pyrethrin yield. Logistic regression was used to model relationships among edaphic factors and interpolated weather variables associated with severe disease outbreaks (i.e., defoliation severity ≥40%). A model for September defoliation severity included a variable for the product of number of days with rain of at least 0.1 mm and a moving average of maximum temperatures in the last 14 days, which correctly classified (accuracy) the disease severity class for 64.8% of data sets. The percentage of data sets where disease severity was correctly classified as at least 40% defoliation severity (sensitivity) or below 40% defoliation severity (specificity) were 55.8 and 71%, respectively. A model for October defoliation severity included the number of days with at least 1 mm of rain in the past 14 days, stem height in September, and the product of the number of days with at least 10 mm of rain in the last 30 days and September defoliation severity. Accuracy, sensitivity, and specificity were 72.6, 73.6, and 71.4%, respectively. Youden's index identified predictive thresholds of 0.25 and 0.57 for the September and October models, respectively. When economic considerations of the costs of false positive and false negative decisions and disease prevalence were integrated into receiver operating characteristic (ROC) curves for the October model, the optimal predictive threshold to minimize average management costs was 0 for values of disease prevalence greater than 0.2 due to the high cost of false negative predictions. ROC curve analysis indicated that management of the disease should be routine when disease prevalence is greater than 0.2. The models developed in this research are the first steps toward identifying and weighting site and weather disease risk variables to develop a decision-support aid for the management of ray blight of pyrethrum. © 2009 The American Phytopathological Society.

Item Details

Item Type:Refereed Article
Research Division:Biological Sciences
Research Group:Plant Biology
Research Field:Plant Pathology
Objective Division:Plant Production and Plant Primary Products
Objective Group:Horticultural Crops
Objective Field:Horticultural Crops not elsewhere classified
UTAS Author:Pethybridge, SJ (Dr Sarah Pethybridge)
UTAS Author:Gent, DH (Dr David Gent)
UTAS Author:Hay, FS (Dr Frank Hay)
ID Code:53535
Year Published:2009
Funding Support:Australian Research Council (LP0560562)
Web of Science® Times Cited:18
Deposited By:Agricultural Science
Deposited On:2008-12-10
Last Modified:2010-05-28
Downloads:0

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