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Biogeography of culturable marine bacteria from both poles reveals that ‘everything is not everywhere’ at the genomic level

Citation

Qin, Q-L and Wang, Z-B and Cha, Q-Q and Liu, S-S and Ren, X-B and Fu, H-H and Sun, M-L and Zhao, D-L and McMinn, A and Chen, Y and Chen, X-L and Zhang, Y-Z and Li, P-Y, Biogeography of culturable marine bacteria from both poles reveals that everything is not everywhere' at the genomic level, Environmental Microbiology, 24, (1) pp. 98-109. ISSN 1462-2912 (2022) [Refereed Article]

Copyright Statement

© 2021 Society for Applied Microbiology and John Wiley & Sons Ltd.

DOI: doi:10.1111/1462-2920.15870

Abstract

Based on 16S rRNA gene analyses, the same bacterial operational taxonomic units (OTUs) are common to both the Arctic and Antarctic oceans, supporting the concept ‘everything is everywhere’. However, whether the same OTUs from both poles have identical genomes, i.e. whether ‘everything is still everywhere’ at the genomic level has not yet been examined systematically. Here, we isolated, sequenced and compared the genomes of 45 culturable marine bacteria belonging to three genera of Salinibacterium, Psychrobacter and Pseudoalteromonas from both polar oceans. The bacterial strains with identical 16S rRNA genes were common to both poles in every genus, and four identical genomes were detected in the genus Salinibacterium from the Arctic region. However, no identical genomes were observed from opposite poles in this study. Our data, therefore, suggest that ‘everything is not everywhere’ at the genomic level. The divergence time between bacteria is hypothesized to exert a strong impact on the bacterial biogeography at the genomic level. The geographical isolation between poles was observed for recently diverged, highly similar genomes, but not for moderately similar genomes. This study thus improves our understanding of the factors affecting the genomic-level biogeography of marine microorganisms isolated from distant locations.

Item Details

Item Type:Refereed Article
Keywords:bacteria, culturable, biogeography
Research Division:Biological Sciences
Research Group:Microbiology
Research Field:Bacteriology
Objective Division:Environmental Management
Objective Group:Marine systems and management
Objective Field:Marine biodiversity
UTAS Author:McMinn, A (Professor Andrew McMinn)
ID Code:148937
Year Published:2022
Web of Science® Times Cited:1
Deposited By:Ecology and Biodiversity
Deposited On:2022-02-23
Last Modified:2022-03-04
Downloads:0

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