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Complete genomic sequence of bacteriophage J2-1: a novel Pseudoalteromonas phenolica phage isolated from the coastal water of Qingdao, China
journal contribution
posted on 2023-05-19, 22:55 authored by Liu, Q, Han, Y, Wang, D, Wang, Q, Liu, X, Li, Y, Song, X, Wang, M, Jiang, Y, Meng, Z, Shao, H, Andrew McMinnAndrew McMinnPhage J2-1 was isolated from surface coastal seawater off Qingdao, China in July 2015. It is the first time that a phage active against Pseudoalteromonas phenolica CECT 7645(T) has been isolated. Morphological analysis using transmission electron microscopy revealed that phage J2-1 has an 87 3 nm head, a 111 ± 3 nm long tail and appears to belong to the family Myoviridae. Genomic analysis of J2-1 revealed a genome size of 142,204 bp with 37.92% G + C content and 180 ORFs. Overall the ORF sequences accounted for 89% of the genome sequence. A genome comparison using the BLASTN tool in the NCBI database found no obvious similarity between J2-1 and other known phages.
History
Publication title
Marine GenomicsVolume
39Pagination
15-18ISSN
1874-7787Department/School
Institute for Marine and Antarctic StudiesPublisher
Elsevier BVPlace of publication
NetherlandsRights statement
Copyright 2017 Elsevier B.V.Repository Status
- Restricted