University of Tasmania
Browse

File(s) under permanent embargo

Connectedness among test series in mixed linear models of genetic evaluation for forest trees

journal contribution
posted on 2023-05-18, 17:00 authored by Richard KerrRichard Kerr, Greg DutkowskiGreg Dutkowski, Jansson, G, Persson, T, Westin, J
In forest tree species with large natural ranges, there are usually several to many separate breeding populations, each designed to capture elite material suited to a particular geographic region. Separate test series are often dedicated to each population. Because the aim is to optimise gain in the meta-population, it is important to ensure that test series are linked so that individuals can be compared across test series as well as within. Computer simulation was used to determine the most efficient strategy for obtaining linkage. The average accuracy of a genetic value contrast between individuals in the same and in different test series was used as the criterion for assessing the optimal level of linkage. Accuracy is a function of the elements of the inverse coefficient matrix for a mixed linear model within a best linear unbiased prediction framework (BLUP). Material used to link test series was either common test families, common check-lots such as seed orchard bulks, or families generated by inter-crossing parents from different test series. Use of common test families was the most efficient strategy for the scenarios tested, which included having 50 parents crossed to produce 50 test families in each of three populations. For a low-heritability scenario, the amount of linkage material, relative to test material, needed to be 8 and 12%, for progeny and parents, respectively, in order for a contrast between individuals in different test series to have equivalent accuracy as a contrast between individuals in the same test series. Other strategies were less efficient in terms of the amount of linkage material needed to obtain this equivalency.

History

Publication title

Tree Genetics and Genomes

Volume

11

Issue

4

Article number

67

Number

67

Pagination

1-13

ISSN

1614-2942

Department/School

School of Natural Sciences

Publisher

Springer

Place of publication

Germany

Rights statement

Copyright 2015 Springer-Verlag Berlin Heidelberg

Repository Status

  • Restricted

Socio-economic Objectives

Forestry not elsewhere classified

Usage metrics

    University Of Tasmania

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC